Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 KRT18P48-201ENST00000434763 852 ntBASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RAB3IL1Q8TBN0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 FAM87A-204ENST00000613235 858 ntBASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IL1Q8TBN0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms