Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 AC098831.1-202ENST00000438821 336 ntBASIC18.14■□□□□ 0.49
UBA3Q8TBC4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 AC117500.6-201ENST00000624871 588 ntBASIC18.14■□□□□ 0.49
UBA3Q8TBC4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 PI4KAP1-204ENST00000612579 1703 ntBASIC18.14■□□□□ 0.49
UBA3Q8TBC4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 AC022211.2-201ENST00000585075 2527 ntBASIC18.13■□□□□ 0.49
UBA3Q8TBC4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBA3Q8TBC4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 AC005593.1-201ENST00000624894 515 ntBASIC18.12■□□□□ 0.49
UBA3Q8TBC4 AL805961.1-202ENST00000641562 540 ntBASIC18.12■□□□□ 0.49
UBA3Q8TBC4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBA3Q8TBC4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.11■□□□□ 0.49
UBA3Q8TBC4 AP002414.1-201ENST00000391405 1147 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms