Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 LINC01711-201ENST00000598340 967 ntBASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AL732292.2-201ENST00000609649 430 ntBASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AC097637.2-201ENST00000624096 1997 ntBASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AL139288.1-201ENST00000623748 933 ntBASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AD000864.1-201ENST00000624076 2295 ntBASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TTC9CQ8N5M4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 AL513477.1-201ENST00000602865 2407 ntBASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TTC9CQ8N5M4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms