Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 AC008608.2-201ENST00000606089 416 ntBASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PCDHA12-202ENST00000613593 2588 ntBASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF440Q8IYI8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AP002414.1-201ENST00000391405 1147 ntBASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AC139887.3-201ENST00000568585 713 ntBASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 AC005915.1-201ENST00000624912 2018 ntBASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF440Q8IYI8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 AL139424.1-201ENST00000607572 797 ntBASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF440Q8IYI8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms