Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 AC093503.3-201ENST00000624917 2352 ntBASIC23.96■■□□□ 1.43
UBR1Q8IWV7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
UBR1Q8IWV7 RAB43P1-201ENST00000561790 589 ntBASIC23.96■■□□□ 1.43
UBR1Q8IWV7 AC105021.1-202ENST00000570572 669 ntBASIC23.96■■□□□ 1.43
UBR1Q8IWV7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
UBR1Q8IWV7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
UBR1Q8IWV7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
UBR1Q8IWV7 KRT8P49-201ENST00000604166 1432 ntBASIC23.95■■□□□ 1.43
UBR1Q8IWV7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 AC092658.1-201ENST00000505836 891 ntBASIC23.95■■□□□ 1.42
UBR1Q8IWV7 RNA5SP410-201ENST00000516285 106 ntBASIC23.95■■□□□ 1.42
UBR1Q8IWV7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBR1Q8IWV7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 MIR4525-201ENST00000580000 75 ntBASIC23.94■■□□□ 1.42
UBR1Q8IWV7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 AL023806.1-201ENST00000603994 1649 ntBASIC23.94■■□□□ 1.42
UBR1Q8IWV7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.94■■□□□ 1.42
UBR1Q8IWV7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 MPDU1-223ENST00000582151 728 ntBASIC23.93■■□□□ 1.42
UBR1Q8IWV7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 MIR4259-201ENST00000584466 101 ntBASIC23.93■■□□□ 1.42
UBR1Q8IWV7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC23.93■■□□□ 1.42
UBR1Q8IWV7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.92■■□□□ 1.42
UBR1Q8IWV7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms