Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC112777.1-201ENST00000540175 1423 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
APLFQ8IW19 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 MRPL3P1-201ENST00000400109 1033 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.06■□□□□ 0.32
APLFQ8IW19 SAPCD2P3-201ENST00000455031 850 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.06■□□□□ 0.32
APLFQ8IW19 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.06■□□□□ 0.32
APLFQ8IW19 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC064862.7-201ENST00000604520 867 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC006538.3-201ENST00000612495 578 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.06■□□□□ 0.32
APLFQ8IW19 REXO1L6P-202ENST00000619970 1078 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.06■□□□□ 0.32
APLFQ8IW19 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 PKD1P5-201ENST00000532415 10291 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 NSUN5P1-202ENST00000421140 1535 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 NSUN5P2-203ENST00000457352 1529 ntBASIC17.06■□□□□ 0.32
APLFQ8IW19 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.06■□□□□ 0.32
APLFQ8IW19 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.05■□□□□ 0.32
APLFQ8IW19 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
APLFQ8IW19 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
APLFQ8IW19 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
APLFQ8IW19 AL353692.3-201ENST00000407031 1396 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 CYP2T1P-202ENST00000641596 2535 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 LYSMD4-203ENST00000378904 2122 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 AC104640.1-201ENST00000562617 2109 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 HLA-A-201ENST00000376802 1334 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
APLFQ8IW19 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.05■□□□□ 0.32
APLFQ8IW19 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.05■□□□□ 0.32
APLFQ8IW19 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.05■□□□□ 0.32
APLFQ8IW19 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.05■□□□□ 0.32
APLFQ8IW19 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 BX640515.1-201ENST00000617215 977 ntBASIC17.05■□□□□ 0.32
APLFQ8IW19 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.05■□□□□ 0.32
APLFQ8IW19 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.05■□□□□ 0.32
APLFQ8IW19 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APLFQ8IW19 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms