Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC012615.1-201ENST00000565797 1299 ntBASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC092329.2-201ENST00000598402 547 ntBASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 PCDHA14-201ENST00000506751 2298 ntBASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 PMPCAP1-201ENST00000508114 1576 ntBASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AC138894.3-201ENST00000603787 634 ntBASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 AC010331.1-201ENST00000611423 582 ntBASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC00346Q8IVM7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms