Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 SLC25A1P3-201ENST00000395415 828 ntBASIC19.04■□□□□ 0.64
TRIM50Q86XT4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM50Q86XT4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 REXO1L3P-201ENST00000622202 1288 ntBASIC19.03■□□□□ 0.64
TRIM50Q86XT4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM50Q86XT4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms