Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 RN7SL219P-201ENST00000582872 296 ntBASIC21.32■■□□□ 1
RGPD4Q7Z3J3 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.32■■□□□ 1
RGPD4Q7Z3J3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.32■■□□□ 1
RGPD4Q7Z3J3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 PDIA3P1-201ENST00000471856 1510 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 RNA5SP412-201ENST00000516234 123 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 AC004461.2-201ENST00000629517 803 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 EGFEM1P-202ENST00000431685 1563 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 CROCCP3-202ENST00000420820 1947 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 LYSMD4-203ENST00000378904 2122 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 SLC25A1P3-201ENST00000395415 828 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 MEP1AP4-201ENST00000423244 1087 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 RHOQP1-201ENST00000555758 579 ntBASIC21.31■■□□□ 1
RGPD4Q7Z3J3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.31■■□□□ 1
RGPD4Q7Z3J3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.3■■□□□ 1
RGPD4Q7Z3J3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AC099336.1-201ENST00000417053 1171 ntBASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AL589987.1-201ENST00000453380 819 ntBASIC21.3■■□□□ 1
RGPD4Q7Z3J3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.3■■□□□ 1
RGPD4Q7Z3J3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.29■■□□□ 1
RGPD4Q7Z3J3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms