Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AC005521.1-201ENST00000393351 872 ntBASIC15.54■□□□□ 0.08
SHFQ7M4L6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AC112907.2-201ENST00000448639 330 ntBASIC15.54■□□□□ 0.08
SHFQ7M4L6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AC092647.4-201ENST00000457211 535 ntBASIC15.54■□□□□ 0.08
SHFQ7M4L6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 AL390719.2-201ENST00000606993 987 ntBASIC15.54■□□□□ 0.08
SHFQ7M4L6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SHFQ7M4L6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 AC026691.1-201ENST00000602502 2017 ntBASIC15.53■□□□□ 0.08
SHFQ7M4L6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 MYCLP1-201ENST00000372451 1075 ntBASIC15.53■□□□□ 0.08
SHFQ7M4L6 COX5BP2-201ENST00000392354 334 ntBASIC15.53■□□□□ 0.08
SHFQ7M4L6 AK4P3-201ENST00000418260 669 ntBASIC15.53■□□□□ 0.08
SHFQ7M4L6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHFQ7M4L6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.53■□□□□ 0.08
SHFQ7M4L6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHFQ7M4L6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SHFQ7M4L6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.52■□□□□ 0.08
SHFQ7M4L6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.52■□□□□ 0.08
SHFQ7M4L6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHFQ7M4L6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHFQ7M4L6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHFQ7M4L6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms