Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 AL022326.1-202ENST00000641533 845 ntBASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 AD000864.1-201ENST00000624076 2295 ntBASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H2AA3Q6FI13 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 SCARNA2-201ENST00000458748 420 ntBASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 BX005266.1-201ENST00000473402 457 ntBASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 KRT18P56-201ENST00000507275 550 ntBASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 NKAPP1-205ENST00000585790 367 ntBASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST2H2AA3Q6FI13 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H2AA3Q6FI13 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms