Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 AP001005.1-201ENST00000571755 1248 ntBASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 HLA-A-201ENST00000376802 1334 ntBASIC15.93■□□□□ 0.14
PRICKLE4Q2TBC4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 AC087163.2-201ENST00000457299 853 ntBASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 AC008667.4-201ENST00000607370 168 ntBASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRICKLE4Q2TBC4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC092910.1-201ENST00000482027 1129 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 IGHV3-65-201ENST00000523210 341 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 GGTLC5P-201ENST00000617623 998 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC116407.3-201ENST00000623905 1129 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC005593.1-201ENST00000624894 515 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TUBB7P-202ENST00000428444 1305 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.91■□□□□ 0.14
PRICKLE4Q2TBC4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 AL021920.2-201ENST00000624828 1351 ntBASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 AC093909.1-201ENST00000504731 1122 ntBASIC15.9■□□□□ 0.14
PRICKLE4Q2TBC4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms