Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 AC128676.1-201ENST00000454392 318 ntBASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 AC010491.1-201ENST00000563101 2797 ntBASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 AC013268.4-201ENST00000637413 2228 ntBASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC6LQ2NKX8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 AL353807.1-201ENST00000427475 662 ntBASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 KRT18P65-201ENST00000439811 1286 ntBASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 RN7SL471P-201ENST00000580476 299 ntBASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC6LQ2NKX8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC6LQ2NKX8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms