Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DRB3P79483 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 DOC2GP-204ENST00000639052 2548 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC092068.3-201ENST00000587894 2016 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC003669.1-201ENST00000334569 611 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 KLF4P1-201ENST00000412782 1185 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC009533.2-201ENST00000543664 586 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AL136038.3-201ENST00000561909 1096 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AL135999.2-201ENST00000622438 1686 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 AC078925.2-201ENST00000624013 1973 ntBASIC14.38□□□□□ -0.11
HLA-DRB3P79483 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB3P79483 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 RN7SL850P-201ENST00000579959 291 ntBASIC14.37□□□□□ -0.11
HLA-DRB3P79483 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HLA-DRB3P79483 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms