Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTA1P68133 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.3■□□□□ 0.04
ACTA1P68133 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTA1P68133 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
ACTA1P68133 AC005363.2-201ENST00000618631 242 ntBASIC15.3■□□□□ 0.04
ACTA1P68133 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.3■□□□□ 0.04
ACTA1P68133 Z83836.1-201ENST00000624605 1642 ntBASIC15.3■□□□□ 0.04
ACTA1P68133 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTA1P68133 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ACTA1P68133 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTA1P68133 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTA1P68133 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTA1P68133 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTA1P68133 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ACTA1P68133 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ACTA1P68133 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 AC125634.1-201ENST00000438758 1403 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.29■□□□□ 0.04
ACTA1P68133 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.29■□□□□ 0.04
ACTA1P68133 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.29■□□□□ 0.04
ACTA1P68133 HOMER2P1-201ENST00000455653 964 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 YBX1P2-201ENST00000489612 999 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 GUSBP12-201ENST00000513727 720 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 AC010203.1-204ENST00000548782 407 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 AC012306.2-201ENST00000609350 630 ntBASIC15.29■□□□□ 0.04
ACTA1P68133 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTA1P68133 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTA1P68133 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTA1P68133 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.29■□□□□ 0.04
ACTA1P68133 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 AL135999.2-201ENST00000622438 1686 ntBASIC15.28■□□□□ 0.04
ACTA1P68133 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.28■□□□□ 0.04
ACTA1P68133 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.28■□□□□ 0.04
ACTA1P68133 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.28■□□□□ 0.04
ACTA1P68133 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ACTA1P68133 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
ACTA1P68133 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
ACTA1P68133 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.28■□□□□ 0.04
ACTA1P68133 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ACTA1P68133 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.28■□□□□ 0.04
ACTA1P68133 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.28■□□□□ 0.04
ACTA1P68133 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.28■□□□□ 0.04
ACTA1P68133 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ACTA1P68133 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ACTA1P68133 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACTA1P68133 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms