Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.07■□□□□ 0
SEC61A1P61619 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 AC074051.2-201ENST00000565115 352 ntBASIC15.07■□□□□ 0
SEC61A1P61619 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.07■□□□□ 0
SEC61A1P61619 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
SEC61A1P61619 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 AC233702.3-201ENST00000578656 1387 ntBASIC15.07■□□□□ 0
SEC61A1P61619 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.06■□□□□ 0
SEC61A1P61619 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.06■□□□□ 0
SEC61A1P61619 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SEC61A1P61619 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
SEC61A1P61619 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.06■□□□□ 0
SEC61A1P61619 AP005901.3-202ENST00000581653 237 ntBASIC15.06■□□□□ 0
SEC61A1P61619 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.06■□□□□ 0
SEC61A1P61619 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.06■□□□□ 0
SEC61A1P61619 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.06■□□□□ 0
SEC61A1P61619 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SEC61A1P61619 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.06■□□□□ 0
SEC61A1P61619 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SEC61A1P61619 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SEC61A1P61619 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SEC61A1P61619 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SEC61A1P61619 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.05■□□□□ 0
SEC61A1P61619 AL603756.1-201ENST00000606511 2163 ntBASIC15.05■□□□□ 0
SEC61A1P61619 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.05■□□□□ 0
SEC61A1P61619 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.05■□□□□ 0
SEC61A1P61619 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
SEC61A1P61619 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SEC61A1P61619 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SEC61A1P61619 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.05■□□□□ -0
SEC61A1P61619 HYMAI-201ENST00000635591 3347 ntBASIC15.05■□□□□ -0
SEC61A1P61619 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 AL845331.1-201ENST00000424978 1190 ntBASIC15.05■□□□□ -0
SEC61A1P61619 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 AC113404.2-201ENST00000507884 177 ntBASIC15.05■□□□□ -0
SEC61A1P61619 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.05■□□□□ -0
SEC61A1P61619 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.05■□□□□ -0
SEC61A1P61619 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.05■□□□□ -0
SEC61A1P61619 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SEC61A1P61619 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
SEC61A1P61619 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms