Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PP12613-201ENST00000424958 2230 ntBASIC16.41■□□□□ 0.22
VSX2P58304 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VSX2P58304 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.41■□□□□ 0.22
VSX2P58304 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.41■□□□□ 0.22
VSX2P58304 MIR574-201ENST00000385209 96 ntBASIC16.41■□□□□ 0.22
VSX2P58304 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VSX2P58304 AP002414.1-201ENST00000391405 1147 ntBASIC16.41■□□□□ 0.22
VSX2P58304 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
VSX2P58304 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 AC108073.2-201ENST00000464002 357 ntBASIC16.41■□□□□ 0.22
VSX2P58304 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.41■□□□□ 0.22
VSX2P58304 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
VSX2P58304 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
VSX2P58304 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VSX2P58304 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
VSX2P58304 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSX2P58304 TNRC18P3-201ENST00000441896 2691 ntBASIC16.41■□□□□ 0.22
VSX2P58304 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.4■□□□□ 0.22
VSX2P58304 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
VSX2P58304 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 IGHV3-65-201ENST00000523210 341 ntBASIC16.4■□□□□ 0.22
VSX2P58304 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 MIR4751-201ENST00000578027 74 ntBASIC16.4■□□□□ 0.22
VSX2P58304 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VSX2P58304 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 AC004790.2-201ENST00000623588 572 ntBASIC16.4■□□□□ 0.22
VSX2P58304 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
VSX2P58304 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
VSX2P58304 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSX2P58304 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VSX2P58304 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.4■□□□□ 0.22
VSX2P58304 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VSX2P58304 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
VSX2P58304 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.39■□□□□ 0.22
VSX2P58304 AC093525.9-201ENST00000624961 1746 ntBASIC16.39■□□□□ 0.21
VSX2P58304 OR6D1P-203ENST00000641209 4860 ntBASIC16.39■□□□□ 0.21
VSX2P58304 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VSX2P58304 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VSX2P58304 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.39■□□□□ 0.21
VSX2P58304 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.39■□□□□ 0.21
VSX2P58304 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.39■□□□□ 0.21
VSX2P58304 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VSX2P58304 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.39■□□□□ 0.21
VSX2P58304 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.39■□□□□ 0.21
VSX2P58304 PMS2P1-201ENST00000431037 1228 ntBASIC16.39■□□□□ 0.21
VSX2P58304 KRT18P58-201ENST00000527480 1120 ntBASIC16.39■□□□□ 0.21
VSX2P58304 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.39■□□□□ 0.21
VSX2P58304 AL671883.3-201ENST00000603274 991 ntBASIC16.39■□□□□ 0.21
VSX2P58304 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.39■□□□□ 0.21
VSX2P58304 GGTLC5P-201ENST00000617623 998 ntBASIC16.39■□□□□ 0.21
VSX2P58304 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VSX2P58304 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
VSX2P58304 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VSX2P58304 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSX2P58304 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms