Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH13P55290 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH13P55290 TPSP2-201ENST00000561760 610 ntBASIC16.79■□□□□ 0.28
CDH13P55290 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH13P55290 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDH13P55290 FRMD8P1-201ENST00000440433 1524 ntBASIC16.79■□□□□ 0.28
CDH13P55290 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 PCED1CP-201ENST00000419887 785 ntBASIC16.78■□□□□ 0.28
CDH13P55290 MINOS1P3-201ENST00000457048 203 ntBASIC16.78■□□□□ 0.28
CDH13P55290 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH13P55290 TOB2P1-201ENST00000469761 992 ntBASIC16.78■□□□□ 0.28
CDH13P55290 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDH13P55290 AP002414.4-201ENST00000589764 1148 ntBASIC16.78■□□□□ 0.28
CDH13P55290 BNIP3P18-201ENST00000593976 575 ntBASIC16.78■□□□□ 0.28
CDH13P55290 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDH13P55290 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 AL603756.1-201ENST00000606511 2163 ntBASIC16.78■□□□□ 0.28
CDH13P55290 INTS4P1-201ENST00000438455 1935 ntBASIC16.78■□□□□ 0.28
CDH13P55290 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH13P55290 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH13P55290 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH13P55290 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH13P55290 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CDH13P55290 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CDH13P55290 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 RCN1P2-201ENST00000398357 915 ntBASIC16.77■□□□□ 0.28
CDH13P55290 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH13P55290 DRAXINP1-201ENST00000437611 948 ntBASIC16.77■□□□□ 0.28
CDH13P55290 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 AC096582.2-201ENST00000510860 516 ntBASIC16.77■□□□□ 0.28
CDH13P55290 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH13P55290 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH13P55290 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 Z69720.1-201ENST00000601483 472 ntBASIC16.77■□□□□ 0.28
CDH13P55290 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CDH13P55290 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH13P55290 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH13P55290 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CDH13P55290 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH13P55290 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH13P55290 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH13P55290 PCDHB17P-201ENST00000539533 2393 ntBASIC16.77■□□□□ 0.27
CDH13P55290 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH13P55290 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms