Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 AL450487.1-201ENST00000426799 995 ntBASIC20.89■□□□□ 0.93
PDE1AP54750 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.89■□□□□ 0.93
PDE1AP54750 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.89■□□□□ 0.93
PDE1AP54750 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PDE1AP54750 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.89■□□□□ 0.93
PDE1AP54750 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
PDE1AP54750 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.89■□□□□ 0.93
PDE1AP54750 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE1AP54750 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE1AP54750 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE1AP54750 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.88■□□□□ 0.93
PDE1AP54750 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDE1AP54750 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE1AP54750 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 TUBB8P12-201ENST00000308911 1335 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 TUBB7P-202ENST00000428444 1305 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.88■□□□□ 0.93
PDE1AP54750 TUBB8P7-204ENST00000567960 1332 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.88■□□□□ 0.93
PDE1AP54750 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 AC073621.1-201ENST00000392730 636 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 FAM197Y8-203ENST00000450145 560 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE1AP54750 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.88■□□□□ 0.93
PDE1AP54750 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.88■□□□□ 0.93
PDE1AP54750 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.88■□□□□ 0.93
PDE1AP54750 AC148477.8-201ENST00000624298 468 ntBASIC20.88■□□□□ 0.93
PDE1AP54750 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDE1AP54750 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDE1AP54750 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE1AP54750 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE1AP54750 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDE1AP54750 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PDE1AP54750 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 AC092171.3-201ENST00000610122 2651 ntBASIC20.87■□□□□ 0.93
PDE1AP54750 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE1AP54750 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.87■□□□□ 0.93
PDE1AP54750 OR7E14P-202ENST00000530490 1290 ntBASIC20.87■□□□□ 0.93
PDE1AP54750 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE1AP54750 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE1AP54750 AC006557.2-201ENST00000592985 1240 ntBASIC20.87■□□□□ 0.93
PDE1AP54750 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE1AP54750 AC104692.2-201ENST00000603054 253 ntBASIC20.87■□□□□ 0.93
PDE1AP54750 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE1AP54750 AL031008.1-201ENST00000619963 541 ntBASIC20.87■□□□□ 0.93
PDE1AP54750 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE1AP54750 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE1AP54750 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE1AP54750 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE1AP54750 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE1AP54750 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE1AP54750 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE1AP54750 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PDE1AP54750 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PDE1AP54750 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms