Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.85□□□□□ -0.03
HCFC1P51610 MIR4515-201ENST00000584082 81 ntBASIC14.85□□□□□ -0.03
HCFC1P51610 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 AL390754.1-201ENST00000619088 582 ntBASIC14.85□□□□□ -0.03
HCFC1P51610 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.85□□□□□ -0.03
HCFC1P51610 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.85□□□□□ -0.03
HCFC1P51610 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
HCFC1P51610 WASH6P-202ENST00000359512 1437 ntBASIC14.85□□□□□ -0.03
HCFC1P51610 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
HCFC1P51610 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.85□□□□□ -0.03
HCFC1P51610 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.85□□□□□ -0.03
HCFC1P51610 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.85□□□□□ -0.03
HCFC1P51610 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.85□□□□□ -0.03
HCFC1P51610 RN7SL589P-201ENST00000481268 310 ntBASIC14.85□□□□□ -0.03
HCFC1P51610 RNA5SP421-201ENST00000516864 134 ntBASIC14.85□□□□□ -0.03
HCFC1P51610 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.85□□□□□ -0.03
HCFC1P51610 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.85□□□□□ -0.03
HCFC1P51610 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.85□□□□□ -0.03
HCFC1P51610 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCFC1P51610 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.84□□□□□ -0.03
HCFC1P51610 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.84□□□□□ -0.03
HCFC1P51610 HMGA1P7-201ENST00000406908 502 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 MRPS18AP1-201ENST00000414458 589 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 CNN2P2-201ENST00000443536 909 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 CRB3P1-201ENST00000449338 276 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 CNN2P3-201ENST00000450201 906 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 HLA-J-202ENST00000469281 1241 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 AC005225.4-201ENST00000557330 545 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.84□□□□□ -0.03
HCFC1P51610 MIR4745-201ENST00000577608 62 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.84□□□□□ -0.03
HCFC1P51610 LINC02560-201ENST00000596379 459 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 AL136317.3-201ENST00000618497 906 ntBASIC14.84□□□□□ -0.03
HCFC1P51610 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HCFC1P51610 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HCFC1P51610 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.84□□□□□ -0.03
HCFC1P51610 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HCFC1P51610 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.84□□□□□ -0.03
HCFC1P51610 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCFC1P51610 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCFC1P51610 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HCFC1P51610 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCFC1P51610 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HCFC1P51610 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.83□□□□□ -0.03
HCFC1P51610 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.83□□□□□ -0.03
HCFC1P51610 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.83□□□□□ -0.03
HCFC1P51610 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.83□□□□□ -0.03
HCFC1P51610 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.03
HCFC1P51610 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.83□□□□□ -0.03
HCFC1P51610 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCFC1P51610 AL161645.1-201ENST00000622716 1255 ntBASIC14.83□□□□□ -0.03
HCFC1P51610 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
HCFC1P51610 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HCFC1P51610 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms