Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 AC006449.5-201ENST00000610658 2098 ntBASIC15.26■□□□□ 0.03
SRP9P49458 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 KRT18P1-202ENST00000452408 1331 ntBASIC15.26■□□□□ 0.03
SRP9P49458 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SRP9P49458 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SRP9P49458 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.26■□□□□ 0.03
SRP9P49458 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.26■□□□□ 0.03
SRP9P49458 AC011840.4-201ENST00000578471 627 ntBASIC15.26■□□□□ 0.03
SRP9P49458 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 AL592071.1-201ENST00000611956 408 ntBASIC15.26■□□□□ 0.03
SRP9P49458 AC093458.2-201ENST00000623150 629 ntBASIC15.26■□□□□ 0.03
SRP9P49458 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.26■□□□□ 0.03
SRP9P49458 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.26■□□□□ 0.03
SRP9P49458 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SRP9P49458 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
SRP9P49458 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 AL662844.4-201ENST00000606367 2838 ntBASIC15.25■□□□□ 0.03
SRP9P49458 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 AC007950.2-201ENST00000615045 2347 ntBASIC15.25■□□□□ 0.03
SRP9P49458 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SRP9P49458 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.25■□□□□ 0.03
SRP9P49458 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.25■□□□□ 0.03
SRP9P49458 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 AC116407.2-201ENST00000613639 860 ntBASIC15.25■□□□□ 0.03
SRP9P49458 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.25■□□□□ 0.03
SRP9P49458 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SRP9P49458 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SRP9P49458 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SRP9P49458 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SRP9P49458 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP9P49458 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 TSPY26P-202ENST00000565928 3884 ntBASIC15.24■□□□□ 0.03
SRP9P49458 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms