Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.64■□□□□ 0.9
PHKA1P46020 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.64■□□□□ 0.89
PHKA1P46020 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PHKA1P46020 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.64■□□□□ 0.89
PHKA1P46020 CNN2P11-201ENST00000429351 262 ntBASIC20.64■□□□□ 0.89
PHKA1P46020 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.64■□□□□ 0.89
PHKA1P46020 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 SNHG9-202ENST00000564014 471 ntBASIC20.64■□□□□ 0.89
PHKA1P46020 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.64■□□□□ 0.89
PHKA1P46020 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.64■□□□□ 0.89
PHKA1P46020 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PHKA1P46020 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHKA1P46020 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHKA1P46020 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 TOP3BP1-201ENST00000420768 1380 ntBASIC20.63■□□□□ 0.89
PHKA1P46020 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PHKA1P46020 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 ACTG1P14-201ENST00000446382 1122 ntBASIC20.63■□□□□ 0.89
PHKA1P46020 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
PHKA1P46020 AC027612.4-201ENST00000605371 583 ntBASIC20.63■□□□□ 0.89
PHKA1P46020 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.63■□□□□ 0.89
PHKA1P46020 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.63■□□□□ 0.89
PHKA1P46020 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHKA1P46020 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 AL353732.1-201ENST00000569618 1459 ntBASIC20.62■□□□□ 0.89
PHKA1P46020 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.62■□□□□ 0.89
PHKA1P46020 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.62■□□□□ 0.89
PHKA1P46020 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 AC012569.1-201ENST00000591191 1524 ntBASIC20.62■□□□□ 0.89
PHKA1P46020 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.62■□□□□ 0.89
PHKA1P46020 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.62■□□□□ 0.89
PHKA1P46020 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHKA1P46020 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.62■□□□□ 0.89
PHKA1P46020 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHKA1P46020 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHKA1P46020 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHKA1P46020 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.61■□□□□ 0.89
PHKA1P46020 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.61■□□□□ 0.89
PHKA1P46020 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHKA1P46020 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms