Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.73■□□□□ 0.59
USP8P40818 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 UPK3BP1-201ENST00000428678 509 ntBASIC18.73■□□□□ 0.59
USP8P40818 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.73■□□□□ 0.59
USP8P40818 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.73■□□□□ 0.59
USP8P40818 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.73■□□□□ 0.59
USP8P40818 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
USP8P40818 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.73■□□□□ 0.59
USP8P40818 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 AC011676.5-201ENST00000624864 2660 ntBASIC18.72■□□□□ 0.59
USP8P40818 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
USP8P40818 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
USP8P40818 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
USP8P40818 ATP5G2P1-201ENST00000433580 426 ntBASIC18.72■□□□□ 0.59
USP8P40818 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.72■□□□□ 0.59
USP8P40818 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.72■□□□□ 0.59
USP8P40818 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.72■□□□□ 0.59
USP8P40818 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.72■□□□□ 0.59
USP8P40818 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
USP8P40818 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.72■□□□□ 0.59
USP8P40818 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP8P40818 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
USP8P40818 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.71■□□□□ 0.59
USP8P40818 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.71■□□□□ 0.59
USP8P40818 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.71■□□□□ 0.59
USP8P40818 NUS1P2-201ENST00000417358 873 ntBASIC18.71■□□□□ 0.59
USP8P40818 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.71■□□□□ 0.59
USP8P40818 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.71■□□□□ 0.59
USP8P40818 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
USP8P40818 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.71■□□□□ 0.59
USP8P40818 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 AC012615.1-201ENST00000565797 1299 ntBASIC18.71■□□□□ 0.59
USP8P40818 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.71■□□□□ 0.59
USP8P40818 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.71■□□□□ 0.59
USP8P40818 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.71■□□□□ 0.59
USP8P40818 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 AC022211.2-201ENST00000585075 2527 ntBASIC18.71■□□□□ 0.59
USP8P40818 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.71■□□□□ 0.59
USP8P40818 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP8P40818 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
USP8P40818 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
USP8P40818 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
USP8P40818 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP8P40818 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
USP8P40818 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP8P40818 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms