Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXD13P35453 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXD13P35453 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD13P35453 AC098831.1-202ENST00000438821 336 ntBASIC18.65■□□□□ 0.58
HOXD13P35453 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD13P35453 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD13P35453 AP001005.1-201ENST00000571755 1248 ntBASIC18.65■□□□□ 0.58
HOXD13P35453 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXD13P35453 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HOXD13P35453 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD13P35453 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD13P35453 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 TUBB8P12-201ENST00000308911 1335 ntBASIC18.65■□□□□ 0.58
HOXD13P35453 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 TUBB7P-202ENST00000428444 1305 ntBASIC18.65■□□□□ 0.58
HOXD13P35453 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 TUBB8P7-204ENST00000567960 1332 ntBASIC18.65■□□□□ 0.58
HOXD13P35453 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD13P35453 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD13P35453 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD13P35453 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HOXD13P35453 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD13P35453 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.64■□□□□ 0.58
HOXD13P35453 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.64■□□□□ 0.58
HOXD13P35453 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
HOXD13P35453 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.64■□□□□ 0.58
HOXD13P35453 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXD13P35453 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HOXD13P35453 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
HOXD13P35453 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXD13P35453 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXD13P35453 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 RPS2P28-201ENST00000314255 741 ntBASIC18.64■□□□□ 0.57
HOXD13P35453 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXD13P35453 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 AL662844.1-201ENST00000546340 181 ntBASIC18.64■□□□□ 0.57
HOXD13P35453 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXD13P35453 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXD13P35453 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD13P35453 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD13P35453 AL603756.1-201ENST00000606511 2163 ntBASIC18.64■□□□□ 0.57
HOXD13P35453 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXD13P35453 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HOXD13P35453 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXD13P35453 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.63■□□□□ 0.57
HOXD13P35453 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HOXD13P35453 AC108073.2-201ENST00000464002 357 ntBASIC18.63■□□□□ 0.57
HOXD13P35453 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.63■□□□□ 0.57
HOXD13P35453 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXD13P35453 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXD13P35453 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXD13P35453 AC004790.2-201ENST00000623588 572 ntBASIC18.63■□□□□ 0.57
HOXD13P35453 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD13P35453 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD13P35453 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms