Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.4■□□□□ 0.54
HOXA11P31270 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA11P31270 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA11P31270 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA11P31270 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA11P31270 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
HOXA11P31270 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HOXA11P31270 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HOXA11P31270 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HOXA11P31270 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HOXA11P31270 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXA11P31270 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXA11P31270 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXA11P31270 AC109635.5-201ENST00000533593 962 ntBASIC18.39■□□□□ 0.53
HOXA11P31270 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXA11P31270 AC243562.1-201ENST00000560672 389 ntBASIC18.39■□□□□ 0.53
HOXA11P31270 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXA11P31270 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 MIR4492-201ENST00000581627 80 ntBASIC18.39■□□□□ 0.53
HOXA11P31270 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 AC131009.4-201ENST00000624048 1740 ntBASIC18.39■□□□□ 0.53
HOXA11P31270 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA11P31270 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA11P31270 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HOXA11P31270 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA11P31270 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 TFAMP1-201ENST00000412727 736 ntBASIC18.38■□□□□ 0.53
HOXA11P31270 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXA11P31270 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA11P31270 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 TIMM8BP1-201ENST00000452384 211 ntBASIC18.38■□□□□ 0.53
HOXA11P31270 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXA11P31270 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXA11P31270 FAM86C2P-203ENST00000528684 1004 ntBASIC18.38■□□□□ 0.53
HOXA11P31270 AL355385.1-201ENST00000606123 409 ntBASIC18.38■□□□□ 0.53
HOXA11P31270 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA11P31270 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA11P31270 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 AL021920.2-201ENST00000624828 1351 ntBASIC18.38■□□□□ 0.53
HOXA11P31270 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA11P31270 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA11P31270 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA11P31270 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA11P31270 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA11P31270 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HOXA11P31270 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA11P31270 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 RNU1-129P-201ENST00000384064 167 ntBASIC18.37■□□□□ 0.53
HOXA11P31270 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA11P31270 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA11P31270 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.37■□□□□ 0.53
HOXA11P31270 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HOXA11P31270 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA11P31270 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 RFPL4AP1-201ENST00000530883 850 ntBASIC18.37■□□□□ 0.53
HOXA11P31270 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXA11P31270 AC124947.2-201ENST00000547118 1133 ntBASIC18.37■□□□□ 0.53
HOXA11P31270 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA11P31270 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.37■□□□□ 0.53
HOXA11P31270 U1.21-201ENST00000580816 167 ntBASIC18.37■□□□□ 0.53
HOXA11P31270 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms