Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 MTDHP5-201ENST00000598980 586 ntBASIC14.48□□□□□ -0.09
COL8A2P25067 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 AL645608.8-201ENST00000606034 2086 ntBASIC14.48□□□□□ -0.09
COL8A2P25067 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL8A2P25067 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.47□□□□□ -0.09
COL8A2P25067 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
COL8A2P25067 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.47□□□□□ -0.09
COL8A2P25067 GPX1P2-201ENST00000429271 606 ntBASIC14.47□□□□□ -0.09
COL8A2P25067 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.47□□□□□ -0.09
COL8A2P25067 DNAJB3-201ENST00000446806 729 ntBASIC14.47□□□□□ -0.09
COL8A2P25067 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.47□□□□□ -0.09
COL8A2P25067 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.47□□□□□ -0.09
COL8A2P25067 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.47□□□□□ -0.09
COL8A2P25067 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.47□□□□□ -0.09
COL8A2P25067 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.47□□□□□ -0.09
COL8A2P25067 AL513190.1-201ENST00000621254 727 ntBASIC14.47□□□□□ -0.09
COL8A2P25067 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL8A2P25067 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL8A2P25067 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL8A2P25067 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
COL8A2P25067 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.46□□□□□ -0.09
COL8A2P25067 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
COL8A2P25067 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.46□□□□□ -0.09
COL8A2P25067 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.46□□□□□ -0.09
COL8A2P25067 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.46□□□□□ -0.09
COL8A2P25067 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.46□□□□□ -0.09
COL8A2P25067 AC004877.2-201ENST00000623941 599 ntBASIC14.46□□□□□ -0.09
COL8A2P25067 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.46□□□□□ -0.09
COL8A2P25067 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.46□□□□□ -0.09
COL8A2P25067 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL8A2P25067 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.46□□□□□ -0.1
COL8A2P25067 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL8A2P25067 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms