Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VAMP1P23763 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.53□□□□□ -0.08
VAMP1P23763 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.53□□□□□ -0.08
VAMP1P23763 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.53□□□□□ -0.08
VAMP1P23763 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 AC104771.1-201ENST00000603335 964 ntBASIC14.53□□□□□ -0.08
VAMP1P23763 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.53□□□□□ -0.08
VAMP1P23763 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 AC105917.1-201ENST00000506637 2539 ntBASIC14.53□□□□□ -0.08
VAMP1P23763 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.53□□□□□ -0.08
VAMP1P23763 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VAMP1P23763 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.53□□□□□ -0.08
VAMP1P23763 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VAMP1P23763 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.52□□□□□ -0.08
VAMP1P23763 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
VAMP1P23763 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.52□□□□□ -0.08
VAMP1P23763 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.52□□□□□ -0.08
VAMP1P23763 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.52□□□□□ -0.08
VAMP1P23763 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VAMP1P23763 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VAMP1P23763 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.52□□□□□ -0.08
VAMP1P23763 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
VAMP1P23763 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 ESRRAP1-201ENST00000400596 1257 ntBASIC14.52□□□□□ -0.09
VAMP1P23763 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 AC005104.2-201ENST00000427818 678 ntBASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 AC017007.3-201ENST00000479865 435 ntBASIC14.52□□□□□ -0.09
VAMP1P23763 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.52□□□□□ -0.09
VAMP1P23763 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.52□□□□□ -0.09
VAMP1P23763 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 AL139327.4-201ENST00000612362 153 ntBASIC14.52□□□□□ -0.09
VAMP1P23763 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
VAMP1P23763 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VAMP1P23763 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VAMP1P23763 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.52□□□□□ -0.09
VAMP1P23763 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VAMP1P23763 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VAMP1P23763 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.51□□□□□ -0.09
VAMP1P23763 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VAMP1P23763 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.51□□□□□ -0.09
VAMP1P23763 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.51□□□□□ -0.09
VAMP1P23763 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VAMP1P23763 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms