Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.41■□□□□ 0.54
CD58P19256 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.41■□□□□ 0.54
CD58P19256 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 ELK2BP-201ENST00000415014 1224 ntBASIC18.41■□□□□ 0.54
CD58P19256 AL031284.1-201ENST00000419297 478 ntBASIC18.41■□□□□ 0.54
CD58P19256 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.41■□□□□ 0.54
CD58P19256 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.41■□□□□ 0.54
CD58P19256 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.41■□□□□ 0.54
CD58P19256 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.41■□□□□ 0.54
CD58P19256 FAM215A-202ENST00000632077 792 ntBASIC18.41■□□□□ 0.54
CD58P19256 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.41■□□□□ 0.54
CD58P19256 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD58P19256 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CD58P19256 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.41■□□□□ 0.54
CD58P19256 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD58P19256 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 LINC02012-201ENST00000608206 1725 ntBASIC18.4■□□□□ 0.54
CD58P19256 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CD58P19256 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.4■□□□□ 0.54
CD58P19256 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.4■□□□□ 0.54
CD58P19256 AC006557.2-201ENST00000592985 1240 ntBASIC18.4■□□□□ 0.54
CD58P19256 MIR7706-201ENST00000613747 67 ntBASIC18.4■□□□□ 0.54
CD58P19256 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CD58P19256 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.4■□□□□ 0.54
CD58P19256 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD58P19256 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CD58P19256 AP002414.3-201ENST00000589352 1468 ntBASIC18.39■□□□□ 0.54
CD58P19256 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CD58P19256 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.39■□□□□ 0.53
CD58P19256 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.39■□□□□ 0.53
CD58P19256 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CD58P19256 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD58P19256 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.39■□□□□ 0.53
CD58P19256 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.39■□□□□ 0.53
CD58P19256 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.39■□□□□ 0.53
CD58P19256 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CD58P19256 AC008735.5-201ENST00000623544 497 ntBASIC18.39■□□□□ 0.53
CD58P19256 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CD58P19256 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 AL590787.1-201ENST00000568856 1315 ntBASIC18.39■□□□□ 0.53
CD58P19256 AC099398.1-201ENST00000567919 2776 ntBASIC18.39■□□□□ 0.53
CD58P19256 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.39■□□□□ 0.53
CD58P19256 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CD58P19256 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 AC060834.1-201ENST00000443027 2032 ntBASIC18.39■□□□□ 0.53
CD58P19256 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD58P19256 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 AD000864.1-201ENST00000624076 2295 ntBASIC18.38■□□□□ 0.53
CD58P19256 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 RPS2P28-201ENST00000314255 741 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms