Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.28■□□□□ 0.36
VCLP18206 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
VCLP18206 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.28■□□□□ 0.36
VCLP18206 AC005104.2-201ENST00000427818 678 ntBASIC17.28■□□□□ 0.36
VCLP18206 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.28■□□□□ 0.36
VCLP18206 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.28■□□□□ 0.36
VCLP18206 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
VCLP18206 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VCLP18206 AD001527.2-201ENST00000622994 785 ntBASIC17.28■□□□□ 0.36
VCLP18206 AL139288.1-201ENST00000623748 933 ntBASIC17.28■□□□□ 0.36
VCLP18206 AP000867.4-201ENST00000641616 219 ntBASIC17.28■□□□□ 0.36
VCLP18206 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.28■□□□□ 0.36
VCLP18206 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.28■□□□□ 0.36
VCLP18206 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VCLP18206 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCLP18206 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VCLP18206 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VCLP18206 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.27■□□□□ 0.36
VCLP18206 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.27■□□□□ 0.36
VCLP18206 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.27■□□□□ 0.36
VCLP18206 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
VCLP18206 AL160237.2-201ENST00000556165 472 ntBASIC17.27■□□□□ 0.36
VCLP18206 AC109462.3-201ENST00000573934 613 ntBASIC17.27■□□□□ 0.36
VCLP18206 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 AL031008.1-201ENST00000619963 541 ntBASIC17.27■□□□□ 0.36
VCLP18206 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.27■□□□□ 0.36
VCLP18206 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCLP18206 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.27■□□□□ 0.36
VCLP18206 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCLP18206 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCLP18206 CROCCP1-201ENST00000426910 5675 ntBASIC17.27■□□□□ 0.35
VCLP18206 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VCLP18206 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCLP18206 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.27■□□□□ 0.35
VCLP18206 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.35
VCLP18206 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.27■□□□□ 0.35
VCLP18206 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
VCLP18206 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 AL353593.2-201ENST00000602529 1483 ntBASIC17.26■□□□□ 0.35
VCLP18206 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms