Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS1P17812 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS1P17812 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS1P17812 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.23■□□□□ 0.35
CTPS1P17812 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTPS1P17812 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.23■□□□□ 0.35
CTPS1P17812 UNC93B6-202ENST00000528242 690 ntBASIC17.23■□□□□ 0.35
CTPS1P17812 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 AL805961.1-202ENST00000641562 540 ntBASIC17.23■□□□□ 0.35
CTPS1P17812 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.23■□□□□ 0.35
CTPS1P17812 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS1P17812 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTPS1P17812 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS1P17812 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.22■□□□□ 0.35
CTPS1P17812 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 LINC02012-201ENST00000608206 1725 ntBASIC17.22■□□□□ 0.35
CTPS1P17812 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CTPS1P17812 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 RPL13AP23-201ENST00000480739 586 ntBASIC17.22■□□□□ 0.35
CTPS1P17812 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.22■□□□□ 0.35
CTPS1P17812 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 BX640515.1-201ENST00000617215 977 ntBASIC17.22■□□□□ 0.35
CTPS1P17812 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.22■□□□□ 0.35
CTPS1P17812 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS1P17812 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS1P17812 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS1P17812 AC104109.2-201ENST00000602919 1418 ntBASIC17.21■□□□□ 0.35
CTPS1P17812 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.21■□□□□ 0.35
CTPS1P17812 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS1P17812 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS1P17812 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTPS1P17812 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS1P17812 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 AP002414.1-201ENST00000391405 1147 ntBASIC17.21■□□□□ 0.35
CTPS1P17812 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS1P17812 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.21■□□□□ 0.35
CTPS1P17812 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS1P17812 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.21■□□□□ 0.35
CTPS1P17812 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.21■□□□□ 0.35
CTPS1P17812 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.21■□□□□ 0.35
CTPS1P17812 PGM5P2-202ENST00000637225 1043 ntBASIC17.21■□□□□ 0.35
CTPS1P17812 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS1P17812 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms