Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMPD1P17405 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMPD1P17405 AC020763.4-201ENST00000623414 4170 ntBASIC18.92■□□□□ 0.62
SMPD1P17405 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMPD1P17405 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.91■□□□□ 0.62
SMPD1P17405 AC236430.1-201ENST00000402231 743 ntBASIC18.91■□□□□ 0.62
SMPD1P17405 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.91■□□□□ 0.62
SMPD1P17405 SPDYE7P-202ENST00000420373 878 ntBASIC18.91■□□□□ 0.62
SMPD1P17405 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.91■□□□□ 0.62
SMPD1P17405 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.91■□□□□ 0.62
SMPD1P17405 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
SMPD1P17405 MIR3909-201ENST00000579518 119 ntBASIC18.91■□□□□ 0.62
SMPD1P17405 MPDU1-223ENST00000582151 728 ntBASIC18.91■□□□□ 0.62
SMPD1P17405 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMPD1P17405 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.91■□□□□ 0.62
SMPD1P17405 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMPD1P17405 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 AC016027.1-202ENST00000607927 1699 ntBASIC18.91■□□□□ 0.62
SMPD1P17405 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMPD1P17405 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMPD1P17405 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.9■□□□□ 0.62
SMPD1P17405 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.9■□□□□ 0.62
SMPD1P17405 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.9■□□□□ 0.62
SMPD1P17405 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SMPD1P17405 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 AC002472.2-201ENST00000442739 958 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 TSPY16P-201ENST00000449843 468 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.9■□□□□ 0.62
SMPD1P17405 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.9■□□□□ 0.62
SMPD1P17405 ALG1L8P-201ENST00000533887 760 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.9■□□□□ 0.62
SMPD1P17405 RN7SL204P-201ENST00000582831 262 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
SMPD1P17405 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.9■□□□□ 0.62
SMPD1P17405 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.9■□□□□ 0.62
SMPD1P17405 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SMPD1P17405 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 AC016396.2-201ENST00000562575 1417 ntBASIC18.9■□□□□ 0.62
SMPD1P17405 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMPD1P17405 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMPD1P17405 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.89■□□□□ 0.62
SMPD1P17405 AC131009.4-201ENST00000624048 1740 ntBASIC18.89■□□□□ 0.61
SMPD1P17405 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.89■□□□□ 0.61
SMPD1P17405 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.89■□□□□ 0.61
SMPD1P17405 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.89■□□□□ 0.61
SMPD1P17405 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.89■□□□□ 0.61
SMPD1P17405 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SMPD1P17405 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.89■□□□□ 0.61
SMPD1P17405 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 AL138918.1-201ENST00000568306 659 ntBASIC18.89■□□□□ 0.61
SMPD1P17405 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.89■□□□□ 0.61
SMPD1P17405 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.89■□□□□ 0.61
SMPD1P17405 MIR6080-201ENST00000617359 66 ntBASIC18.89■□□□□ 0.61
SMPD1P17405 AL390754.1-201ENST00000619088 582 ntBASIC18.89■□□□□ 0.61
SMPD1P17405 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMPD1P17405 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms