Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A2P13942 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.64■□□□□ 0.9
COL11A2P13942 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL11A2P13942 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.64■□□□□ 0.9
COL11A2P13942 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.64■□□□□ 0.9
COL11A2P13942 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL11A2P13942 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.64■□□□□ 0.9
COL11A2P13942 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.64■□□□□ 0.9
COL11A2P13942 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
COL11A2P13942 AC017083.2-201ENST00000608069 979 ntBASIC20.64■□□□□ 0.9
COL11A2P13942 AC133963.1-201ENST00000504166 1679 ntBASIC20.64■□□□□ 0.9
COL11A2P13942 BX323043.1-201ENST00000641006 1765 ntBASIC20.64■□□□□ 0.9
COL11A2P13942 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.64■□□□□ 0.9
COL11A2P13942 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL11A2P13942 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL11A2P13942 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
COL11A2P13942 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
COL11A2P13942 INE1-201ENST00000456273 945 ntBASIC20.64■□□□□ 0.89
COL11A2P13942 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A2P13942 AC021097.1-201ENST00000607902 574 ntBASIC20.64■□□□□ 0.89
COL11A2P13942 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.63■□□□□ 0.89
COL11A2P13942 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL11A2P13942 KRT18P34-201ENST00000488218 1270 ntBASIC20.63■□□□□ 0.89
COL11A2P13942 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.63■□□□□ 0.89
COL11A2P13942 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A2P13942 FRMD8P1-201ENST00000440433 1524 ntBASIC20.63■□□□□ 0.89
COL11A2P13942 KRT8P49-201ENST00000604166 1432 ntBASIC20.63■□□□□ 0.89
COL11A2P13942 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
COL11A2P13942 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.63■□□□□ 0.89
COL11A2P13942 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 AP006294.1-201ENST00000415407 339 ntBASIC20.62■□□□□ 0.89
COL11A2P13942 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL11A2P13942 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.62■□□□□ 0.89
COL11A2P13942 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 AC073439.1-201ENST00000624121 1774 ntBASIC20.62■□□□□ 0.89
COL11A2P13942 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A2P13942 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.62■□□□□ 0.89
COL11A2P13942 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.61■□□□□ 0.89
COL11A2P13942 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.61■□□□□ 0.89
COL11A2P13942 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COL11A2P13942 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms