Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.01■□□□□ 0.47
RARAP10276 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RARAP10276 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RARAP10276 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RARAP10276 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18■□□□□ 0.47
RARAP10276 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18■□□□□ 0.47
RARAP10276 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18■□□□□ 0.47
RARAP10276 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18■□□□□ 0.47
RARAP10276 NUS1P1-201ENST00000446295 882 ntBASIC18■□□□□ 0.47
RARAP10276 AC132008.2-207ENST00000454517 770 ntBASIC18■□□□□ 0.47
RARAP10276 AC124947.2-201ENST00000547118 1133 ntBASIC18■□□□□ 0.47
RARAP10276 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18■□□□□ 0.47
RARAP10276 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18■□□□□ 0.47
RARAP10276 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18■□□□□ 0.47
RARAP10276 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
RARAP10276 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18■□□□□ 0.47
RARAP10276 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18■□□□□ 0.47
RARAP10276 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18■□□□□ 0.47
RARAP10276 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RARAP10276 EGFEM1P-202ENST00000431685 1563 ntBASIC18■□□□□ 0.47
RARAP10276 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 AL603756.1-201ENST00000606511 2163 ntBASIC17.99■□□□□ 0.47
RARAP10276 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 SIGLEC30P-201ENST00000455569 941 ntBASIC17.99■□□□□ 0.47
RARAP10276 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.99■□□□□ 0.47
RARAP10276 MIR3652-201ENST00000579335 131 ntBASIC17.99■□□□□ 0.47
RARAP10276 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 AP001269.4-201ENST00000609611 512 ntBASIC17.99■□□□□ 0.47
RARAP10276 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.99■□□□□ 0.47
RARAP10276 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RARAP10276 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RARAP10276 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RARAP10276 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RARAP10276 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 SIGLEC16-201ENST00000599858 1437 ntBASIC17.98■□□□□ 0.47
RARAP10276 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RARAP10276 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RARAP10276 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RARAP10276 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.98■□□□□ 0.47
RARAP10276 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms