Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.21■□□□□ 0.35
MMP2P08253 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.21■□□□□ 0.35
MMP2P08253 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 OR7E47P-204ENST00000575924 449 ntBASIC17.21■□□□□ 0.35
MMP2P08253 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.21■□□□□ 0.35
MMP2P08253 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 AC005593.1-201ENST00000624894 515 ntBASIC17.21■□□□□ 0.35
MMP2P08253 PGM5P2-202ENST00000637225 1043 ntBASIC17.21■□□□□ 0.35
MMP2P08253 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MMP2P08253 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MMP2P08253 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MMP2P08253 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
MMP2P08253 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
MMP2P08253 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP2P08253 AC078925.2-201ENST00000624013 1973 ntBASIC17.2■□□□□ 0.34
MMP2P08253 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP2P08253 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP2P08253 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MMP2P08253 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MMP2P08253 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.2■□□□□ 0.34
MMP2P08253 AC108073.2-201ENST00000464002 357 ntBASIC17.2■□□□□ 0.34
MMP2P08253 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP2P08253 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.2■□□□□ 0.34
MMP2P08253 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MMP2P08253 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MMP2P08253 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP2P08253 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 AC026396.1-201ENST00000419388 421 ntBASIC17.19■□□□□ 0.34
MMP2P08253 AC107918.2-201ENST00000530817 355 ntBASIC17.19■□□□□ 0.34
MMP2P08253 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 GGTLC5P-201ENST00000617623 998 ntBASIC17.19■□□□□ 0.34
MMP2P08253 AC004790.2-201ENST00000623588 572 ntBASIC17.19■□□□□ 0.34
MMP2P08253 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 KRT8P49-201ENST00000604166 1432 ntBASIC17.19■□□□□ 0.34
MMP2P08253 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP2P08253 AC011676.5-201ENST00000624864 2660 ntBASIC17.19■□□□□ 0.34
MMP2P08253 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MMP2P08253 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP2P08253 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 TUBB8P12-201ENST00000308911 1335 ntBASIC17.19■□□□□ 0.34
MMP2P08253 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 TUBB7P-202ENST00000428444 1305 ntBASIC17.19■□□□□ 0.34
MMP2P08253 TUBB8P7-204ENST00000567960 1332 ntBASIC17.19■□□□□ 0.34
MMP2P08253 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP2P08253 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP2P08253 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 AL645728.1-201ENST00000366221 2101 ntBASIC17.18■□□□□ 0.34
MMP2P08253 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms