Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 FLJ38576-201ENST00000623820 2459 ntBASIC15.78■□□□□ 0.12
THBS1P07996 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
THBS1P07996 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.78■□□□□ 0.12
THBS1P07996 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
THBS1P07996 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.78■□□□□ 0.12
THBS1P07996 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
THBS1P07996 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.78■□□□□ 0.12
THBS1P07996 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.78■□□□□ 0.12
THBS1P07996 FDX1P1-201ENST00000449115 551 ntBASIC15.78■□□□□ 0.12
THBS1P07996 AC106795.1-205ENST00000512851 1056 ntBASIC15.78■□□□□ 0.12
THBS1P07996 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.78■□□□□ 0.12
THBS1P07996 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.78■□□□□ 0.12
THBS1P07996 RN7SL510P-201ENST00000581311 263 ntBASIC15.78■□□□□ 0.12
THBS1P07996 AC244517.3-201ENST00000616254 1235 ntBASIC15.78■□□□□ 0.12
THBS1P07996 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
THBS1P07996 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.78■□□□□ 0.12
THBS1P07996 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
THBS1P07996 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 AC124067.4-201ENST00000519691 2379 ntBASIC15.78■□□□□ 0.12
THBS1P07996 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.78■□□□□ 0.12
THBS1P07996 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THBS1P07996 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
THBS1P07996 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
THBS1P07996 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.77■□□□□ 0.12
THBS1P07996 AP002414.1-201ENST00000391405 1147 ntBASIC15.77■□□□□ 0.12
THBS1P07996 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 RBM17P3-201ENST00000417687 1192 ntBASIC15.77■□□□□ 0.12
THBS1P07996 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.77■□□□□ 0.12
THBS1P07996 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
THBS1P07996 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.77■□□□□ 0.12
THBS1P07996 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.77■□□□□ 0.12
THBS1P07996 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 AP001269.4-201ENST00000609611 512 ntBASIC15.77■□□□□ 0.12
THBS1P07996 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.77■□□□□ 0.12
THBS1P07996 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THBS1P07996 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.77■□□□□ 0.11
THBS1P07996 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.77■□□□□ 0.11
THBS1P07996 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.11
THBS1P07996 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
THBS1P07996 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.76■□□□□ 0.11
THBS1P07996 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms