Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CAPN1P07384 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 MYCLP1-201ENST00000372451 1075 ntBASIC16.91■□□□□ 0.3
CAPN1P07384 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN1P07384 FAM197Y8-203ENST00000450145 560 ntBASIC16.91■□□□□ 0.3
CAPN1P07384 IGHV3-52-201ENST00000519770 353 ntBASIC16.91■□□□□ 0.3
CAPN1P07384 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN1P07384 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN1P07384 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CAPN1P07384 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CAPN1P07384 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.91■□□□□ 0.3
CAPN1P07384 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN1P07384 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CAPN1P07384 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN1P07384 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN1P07384 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPN1P07384 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 AC106886.4-201ENST00000623557 2502 ntBASIC16.9■□□□□ 0.3
CAPN1P07384 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 AC079776.4-201ENST00000511039 504 ntBASIC16.9■□□□□ 0.3
CAPN1P07384 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN1P07384 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPN1P07384 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN1P07384 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CAPN1P07384 AC008608.2-201ENST00000606089 416 ntBASIC16.9■□□□□ 0.3
CAPN1P07384 AL355877.3-201ENST00000622820 899 ntBASIC16.9■□□□□ 0.3
CAPN1P07384 AC046185.3-201ENST00000623228 1824 ntBASIC16.9■□□□□ 0.3
CAPN1P07384 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPN1P07384 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CAPN1P07384 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
CAPN1P07384 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN1P07384 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CAPN1P07384 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CAPN1P07384 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms