Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 AL390961.4-201ENST00000623958 2535 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHRNA1P02708 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 WASH6P-202ENST00000359512 1437 ntBASIC18.5■□□□□ 0.55
CHRNA1P02708 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA1P02708 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNA1P02708 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRNA1P02708 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 COX20P2-201ENST00000452636 358 ntBASIC18.5■□□□□ 0.55
CHRNA1P02708 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 AC093214.1-201ENST00000511688 1107 ntBASIC18.5■□□□□ 0.55
CHRNA1P02708 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.5■□□□□ 0.55
CHRNA1P02708 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 MIR4745-201ENST00000577608 62 ntBASIC18.5■□□□□ 0.55
CHRNA1P02708 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.5■□□□□ 0.55
CHRNA1P02708 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA1P02708 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA1P02708 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA1P02708 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 AC016396.2-201ENST00000562575 1417 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHRNA1P02708 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNA1P02708 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNA1P02708 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNA1P02708 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNA1P02708 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 SPDYE14P-201ENST00000442619 822 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.49■□□□□ 0.55
CHRNA1P02708 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 RNA5SP421-201ENST00000516864 134 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 AC091167.2-201ENST00000579581 588 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 AC138761.1-201ENST00000584393 385 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 AL031055.1-201ENST00000606362 631 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 AC008677.1-201ENST00000519230 1561 ntBASIC18.49■□□□□ 0.55
CHRNA1P02708 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA1P02708 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA1P02708 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNA1P02708 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CHRNA1P02708 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms