Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLPTM1O96005 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.24■□□□□ 0.19
CLPTM1O96005 AC007663.1-201ENST00000438948 1240 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 AC128688.1-201ENST00000487626 519 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 AC092338.2-201ENST00000568827 1415 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 AC092364.2-201ENST00000596710 2692 ntBASIC16.24■□□□□ 0.19
CLPTM1O96005 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLPTM1O96005 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.24■□□□□ 0.19
CLPTM1O96005 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.24■□□□□ 0.19
CLPTM1O96005 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLPTM1O96005 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 NORAD-201ENST00000565493 5339 ntBASIC16.23■□□□□ 0.19
CLPTM1O96005 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLPTM1O96005 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 AC068587.6-202ENST00000641839 5619 ntBASIC16.23■□□□□ 0.19
CLPTM1O96005 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.23■□□□□ 0.19
CLPTM1O96005 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.23■□□□□ 0.19
CLPTM1O96005 TSPY17P-201ENST00000450329 467 ntBASIC16.23■□□□□ 0.19
CLPTM1O96005 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 AL353719.1-201ENST00000566847 864 ntBASIC16.23■□□□□ 0.19
CLPTM1O96005 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.23■□□□□ 0.19
CLPTM1O96005 FAM87A-204ENST00000613235 858 ntBASIC16.23■□□□□ 0.19
CLPTM1O96005 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLPTM1O96005 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLPTM1O96005 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLPTM1O96005 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CLPTM1O96005 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLPTM1O96005 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
CLPTM1O96005 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 AC046185.3-201ENST00000623228 1824 ntBASIC16.22■□□□□ 0.19
CLPTM1O96005 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPTM1O96005 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.22■□□□□ 0.19
CLPTM1O96005 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLPTM1O96005 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPTM1O96005 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms