Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF3O95398 HIST1H2BPS3-201ENST00000419683 341 ntBASIC25.31■■□□□ 1.64
RAPGEF3O95398 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF3O95398 CROCCP4-201ENST00000457096 498 ntBASIC25.31■■□□□ 1.64
RAPGEF3O95398 ELK1P1-201ENST00000485699 580 ntBASIC25.31■■□□□ 1.64
RAPGEF3O95398 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 PFAS-212ENST00000625942 396 ntTSL 5 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF3O95398 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF3O95398 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 HAUS4P1-201ENST00000406739 1145 ntBASIC25.3■■□□□ 1.64
RAPGEF3O95398 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 TMEM261P1-201ENST00000604899 340 ntBASIC25.3■■□□□ 1.64
RAPGEF3O95398 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC25.3■■□□□ 1.64
RAPGEF3O95398 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF3O95398 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 ACTBP11-201ENST00000436287 1126 ntBASIC25.29■■□□□ 1.64
RAPGEF3O95398 AC234783.1-201ENST00000441761 496 ntBASIC25.29■■□□□ 1.64
RAPGEF3O95398 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 GALT-202ENST00000450095 1280 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 RAB35-202ENST00000534951 939 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC25.29■■□□□ 1.64
RAPGEF3O95398 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 AC131009.4-201ENST00000624048 1740 ntBASIC25.29■■□□□ 1.64
RAPGEF3O95398 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF3O95398 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 LYSMD4-203ENST00000378904 2122 ntBASIC25.28■■□□□ 1.64
RAPGEF3O95398 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF3O95398 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF3O95398 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 FAM220BP-201ENST00000377689 816 ntBASIC25.28■■□□□ 1.64
RAPGEF3O95398 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 AC008735.3-201ENST00000596646 500 ntBASIC25.28■■□□□ 1.64
RAPGEF3O95398 TEX48-202ENST00000612244 662 ntTSL 3 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 KRT8P44-201ENST00000441609 1350 ntBASIC25.28■■□□□ 1.64
RAPGEF3O95398 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF3O95398 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 AC073130.3-201ENST00000624389 2278 ntBASIC25.28■■□□□ 1.64
RAPGEF3O95398 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
RAPGEF3O95398 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
RAPGEF3O95398 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.27■■□□□ 1.64
RAPGEF3O95398 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 WIZP1-201ENST00000531444 2299 ntBASIC25.27■■□□□ 1.64
RAPGEF3O95398 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF3O95398 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms