Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.95□□□□□ -0.02
UPK1BO75841 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
UPK1BO75841 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
UPK1BO75841 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 AC016769.1-201ENST00000409132 1010 ntBASIC14.94□□□□□ -0.02
UPK1BO75841 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 GRK6P1-201ENST00000400595 1711 ntBASIC14.94□□□□□ -0.02
UPK1BO75841 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
UPK1BO75841 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.94□□□□□ -0.02
UPK1BO75841 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UPK1BO75841 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 AC005089.1-201ENST00000619486 2241 ntBASIC14.93□□□□□ -0.02
UPK1BO75841 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
UPK1BO75841 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
UPK1BO75841 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
UPK1BO75841 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 AL355355.2-201ENST00000442321 338 ntBASIC14.93□□□□□ -0.02
UPK1BO75841 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.93□□□□□ -0.02
UPK1BO75841 MIR3180-4-201ENST00000582223 153 ntBASIC14.93□□□□□ -0.02
UPK1BO75841 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
UPK1BO75841 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms