Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
LRCH4O75427 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.81■□□□□ 0.44
LRCH4O75427 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.81■□□□□ 0.44
LRCH4O75427 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.81■□□□□ 0.44
LRCH4O75427 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.81■□□□□ 0.44
LRCH4O75427 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.81■□□□□ 0.44
LRCH4O75427 AC139887.3-201ENST00000568585 713 ntBASIC17.81■□□□□ 0.44
LRCH4O75427 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 AC004706.3-202ENST00000621574 984 ntBASIC17.81■□□□□ 0.44
LRCH4O75427 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.81■□□□□ 0.44
LRCH4O75427 AL645728.1-201ENST00000366221 2101 ntBASIC17.81■□□□□ 0.44
LRCH4O75427 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
LRCH4O75427 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRCH4O75427 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.81■□□□□ 0.44
LRCH4O75427 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRCH4O75427 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 TUBB8P12-201ENST00000308911 1335 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 TUBB7P-202ENST00000428444 1305 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 TUBB8P7-204ENST00000567960 1332 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRCH4O75427 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.8■□□□□ 0.44
LRCH4O75427 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.8■□□□□ 0.44
LRCH4O75427 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRCH4O75427 TERC-201ENST00000602385 541 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 PCDHA14-201ENST00000506751 2298 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRCH4O75427 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.8■□□□□ 0.44
LRCH4O75427 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.8■□□□□ 0.44
LRCH4O75427 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.8■□□□□ 0.44
LRCH4O75427 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 AC092171.3-201ENST00000610122 2651 ntBASIC17.8■□□□□ 0.44
LRCH4O75427 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.8■□□□□ 0.44
LRCH4O75427 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.8■□□□□ 0.44
LRCH4O75427 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH4O75427 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH4O75427 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH4O75427 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH4O75427 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH4O75427 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.79■□□□□ 0.44
LRCH4O75427 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms