Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.39■□□□□ 0.21
LCMT2O60294 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.39■□□□□ 0.21
LCMT2O60294 RPS15P9-201ENST00000494093 319 ntBASIC16.39■□□□□ 0.21
LCMT2O60294 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
LCMT2O60294 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.39■□□□□ 0.21
LCMT2O60294 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.39■□□□□ 0.21
LCMT2O60294 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LCMT2O60294 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.39■□□□□ 0.21
LCMT2O60294 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
LCMT2O60294 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LCMT2O60294 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 AP002414.1-201ENST00000391405 1147 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 AC098831.1-202ENST00000438821 336 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 PAWRP1-201ENST00000451083 565 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.38■□□□□ 0.21
LCMT2O60294 TERC-201ENST00000602385 541 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 AC117500.6-201ENST00000624871 588 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 AL805961.1-202ENST00000641562 540 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LCMT2O60294 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 PI4KAP1-204ENST00000612579 1703 ntBASIC16.38■□□□□ 0.21
LCMT2O60294 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LCMT2O60294 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LCMT2O60294 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.38■□□□□ 0.21
LCMT2O60294 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCMT2O60294 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.37■□□□□ 0.21
LCMT2O60294 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCMT2O60294 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCMT2O60294 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 AC093909.1-201ENST00000504731 1122 ntBASIC16.37■□□□□ 0.21
LCMT2O60294 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 AC124947.2-201ENST00000547118 1133 ntBASIC16.37■□□□□ 0.21
LCMT2O60294 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.37■□□□□ 0.21
LCMT2O60294 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCMT2O60294 MIR1199-201ENST00000621445 119 ntBASIC16.37■□□□□ 0.21
LCMT2O60294 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.37■□□□□ 0.21
LCMT2O60294 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LCMT2O60294 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCMT2O60294 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LCMT2O60294 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms