Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IDH3BO43837 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.81■□□□□ 0.12
IDH3BO43837 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.81■□□□□ 0.12
IDH3BO43837 AC092597.1-201ENST00000487352 616 ntBASIC15.81■□□□□ 0.12
IDH3BO43837 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
IDH3BO43837 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IDH3BO43837 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.81■□□□□ 0.12
IDH3BO43837 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IDH3BO43837 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.81■□□□□ 0.12
IDH3BO43837 AC012306.2-201ENST00000609350 630 ntBASIC15.81■□□□□ 0.12
IDH3BO43837 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IDH3BO43837 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.81■□□□□ 0.12
IDH3BO43837 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.8■□□□□ 0.12
IDH3BO43837 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 TERF1P1-201ENST00000311003 1181 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 HBZP1-201ENST00000354915 429 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
IDH3BO43837 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
IDH3BO43837 COX5BP2-201ENST00000392354 334 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 RNF152P1-201ENST00000397754 604 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 TSPY5P-201ENST00000426936 936 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.8■□□□□ 0.12
IDH3BO43837 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.8■□□□□ 0.12
IDH3BO43837 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
IDH3BO43837 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.8■□□□□ 0.12
IDH3BO43837 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.8■□□□□ 0.12
IDH3BO43837 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IDH3BO43837 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 AC073508.3-201ENST00000619697 1419 ntBASIC15.79■□□□□ 0.12
IDH3BO43837 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 MYCLP1-201ENST00000372451 1075 ntBASIC15.79■□□□□ 0.12
IDH3BO43837 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.79■□□□□ 0.12
IDH3BO43837 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 AL359075.1-203ENST00000462729 1002 ntBASIC15.79■□□□□ 0.12
IDH3BO43837 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.79■□□□□ 0.12
IDH3BO43837 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms