Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP005117.1-201ENST00000584346 1413 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.23■□□□□ 0.67
ACTN4O43707 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.23■□□□□ 0.67
ACTN4O43707 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.23■□□□□ 0.67
ACTN4O43707 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACTN4O43707 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.22■□□□□ 0.67
ACTN4O43707 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
ACTN4O43707 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.22■□□□□ 0.67
ACTN4O43707 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ACTN4O43707 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.22■□□□□ 0.67
ACTN4O43707 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.22■□□□□ 0.67
ACTN4O43707 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACTN4O43707 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
ACTN4O43707 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
ACTN4O43707 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 AP002414.1-201ENST00000391405 1147 ntBASIC19.21■□□□□ 0.67
ACTN4O43707 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.21■□□□□ 0.67
ACTN4O43707 KRT16P4-201ENST00000453883 522 ntBASIC19.21■□□□□ 0.67
ACTN4O43707 AC132008.2-207ENST00000454517 770 ntBASIC19.21■□□□□ 0.67
ACTN4O43707 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ACTN4O43707 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.21■□□□□ 0.67
ACTN4O43707 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.21■□□□□ 0.67
ACTN4O43707 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.21■□□□□ 0.67
ACTN4O43707 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.21■□□□□ 0.67
ACTN4O43707 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.21■□□□□ 0.67
ACTN4O43707 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.21■□□□□ 0.67
ACTN4O43707 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
ACTN4O43707 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ACTN4O43707 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.21■□□□□ 0.67
ACTN4O43707 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ACTN4O43707 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACTN4O43707 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ACTN4O43707 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 AL603756.1-201ENST00000606511 2163 ntBASIC19.2■□□□□ 0.66
ACTN4O43707 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ACTN4O43707 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.2■□□□□ 0.66
ACTN4O43707 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 AC106795.1-205ENST00000512851 1056 ntBASIC19.2■□□□□ 0.66
ACTN4O43707 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms