Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
MSI1O43347 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.77■□□□□ 0.43
MSI1O43347 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.43
MSI1O43347 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MSI1O43347 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
MSI1O43347 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MSI1O43347 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 LINC02012-201ENST00000608206 1725 ntBASIC17.76■□□□□ 0.43
MSI1O43347 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MSI1O43347 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
MSI1O43347 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.76■□□□□ 0.43
MSI1O43347 RNA5SP416-201ENST00000516838 111 ntBASIC17.76■□□□□ 0.43
MSI1O43347 PGAM5P1-201ENST00000518923 814 ntBASIC17.76■□□□□ 0.43
MSI1O43347 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.76■□□□□ 0.43
MSI1O43347 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.76■□□□□ 0.43
MSI1O43347 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MSI1O43347 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MSI1O43347 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MSI1O43347 AC002310.6-201ENST00000624451 1377 ntBASIC17.76■□□□□ 0.43
MSI1O43347 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
MSI1O43347 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MSI1O43347 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 PMS2P7-201ENST00000506558 1336 ntBASIC17.75■□□□□ 0.43
MSI1O43347 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
MSI1O43347 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MSI1O43347 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 OR6D1P-202ENST00000641007 5290 ntBASIC17.75■□□□□ 0.43
MSI1O43347 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MSI1O43347 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.75■□□□□ 0.43
MSI1O43347 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.75■□□□□ 0.43
MSI1O43347 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.75■□□□□ 0.43
MSI1O43347 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.75■□□□□ 0.43
MSI1O43347 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.75■□□□□ 0.43
MSI1O43347 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.75■□□□□ 0.43
MSI1O43347 AC010507.1-201ENST00000633895 436 ntBASIC17.75■□□□□ 0.43
MSI1O43347 FRMD8P1-201ENST00000440433 1524 ntBASIC17.75■□□□□ 0.43
MSI1O43347 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
MSI1O43347 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MSI1O43347 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MSI1O43347 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MSI1O43347 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MSI1O43347 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MSI1O43347 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MSI1O43347 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MSI1O43347 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MSI1O43347 AC023274.1-201ENST00000418278 595 ntBASIC17.74■□□□□ 0.43
MSI1O43347 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.74■□□□□ 0.43
MSI1O43347 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.74■□□□□ 0.43
MSI1O43347 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms