Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A1O00337 TUBB8P12-201ENST00000308911 1335 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 TUBB7P-202ENST00000428444 1305 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 TUBB8P7-204ENST00000567960 1332 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A1O00337 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A1O00337 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A1O00337 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A1O00337 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A1O00337 RCN1P2-201ENST00000398357 915 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 POM121L3P-201ENST00000419331 1163 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 PCED1CP-201ENST00000419887 785 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 AL020989.1-201ENST00000422979 469 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 ACTG1P4-201ENST00000425123 1122 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC28A1O00337 AP002383.4-201ENST00000442518 975 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC28A1O00337 TOB2P1-201ENST00000469761 992 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A1O00337 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A1O00337 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC28A1O00337 AP002414.4-201ENST00000589764 1148 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 BNIP3P18-201ENST00000593976 575 ntBASIC16.52■□□□□ 0.24
SLC28A1O00337 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC28A1O00337 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SLC28A1O00337 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC28A1O00337 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC28A1O00337 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC28A1O00337 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC28A1O00337 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SLC28A1O00337 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC28A1O00337 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC28A1O00337 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A1O00337 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC28A1O00337 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SLC28A1O00337 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 LINC00265-3P-201ENST00000447588 903 ntBASIC16.51■□□□□ 0.23
SLC28A1O00337 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC28A1O00337 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A1O00337 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A1O00337 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC28A1O00337 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC28A1O00337 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SLC28A1O00337 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
SLC28A1O00337 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A1O00337 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 PCDHB19P-201ENST00000570871 2371 ntBASIC16.5■□□□□ 0.23
SLC28A1O00337 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC28A1O00337 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SLC28A1O00337 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SLC28A1O00337 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC28A1O00337 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A1O00337 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC28A1O00337 IGHV3-47-201ENST00000425060 335 ntBASIC16.5■□□□□ 0.23
SLC28A1O00337 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms