Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLIC1O00299 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
CLIC1O00299 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLIC1O00299 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.19■□□□□ 0.18
CLIC1O00299 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLIC1O00299 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CLIC1O00299 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.18■□□□□ 0.18
CLIC1O00299 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.18■□□□□ 0.18
CLIC1O00299 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLIC1O00299 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CLIC1O00299 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 PCDHB17P-201ENST00000539533 2393 ntBASIC16.18■□□□□ 0.18
CLIC1O00299 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLIC1O00299 AC091607.1-201ENST00000490318 1060 ntBASIC16.18■□□□□ 0.18
CLIC1O00299 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.18■□□□□ 0.18
CLIC1O00299 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.18■□□□□ 0.18
CLIC1O00299 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.18■□□□□ 0.18
CLIC1O00299 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
CLIC1O00299 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.18■□□□□ 0.18
CLIC1O00299 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
CLIC1O00299 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLIC1O00299 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
CLIC1O00299 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLIC1O00299 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC1O00299 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC1O00299 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC1O00299 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC1O00299 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC1O00299 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.17■□□□□ 0.18
CLIC1O00299 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.17■□□□□ 0.18
CLIC1O00299 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CLIC1O00299 RN7SL850P-201ENST00000579959 291 ntBASIC16.17■□□□□ 0.18
CLIC1O00299 AC073592.5-201ENST00000624854 528 ntBASIC16.17■□□□□ 0.18
CLIC1O00299 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC1O00299 AC006449.5-201ENST00000610658 2098 ntBASIC16.17■□□□□ 0.18
CLIC1O00299 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC1O00299 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLIC1O00299 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CLIC1O00299 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms