Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PNMA6B-201ENST00000538162 1200 ntBASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MIR3180-4-201ENST00000582223 153 ntBASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC131212.1-201ENST00000613771 668 ntBASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC005104.2-201ENST00000427818 678 ntBASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AL139246.5-201ENST00000606645 996 ntBASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC008622.2-201ENST00000617006 1229 ntBASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.87□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms