Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 RPS8P6-201ENST00000426177 609 ntBASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 KRT18P2-201ENST00000447938 1258 ntBASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AC112482.1-201ENST00000492080 688 ntBASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AL139327.4-201ENST00000612362 153 ntBASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AC004790.2-201ENST00000623588 572 ntBASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA2E9PIF3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 LINC00982-205ENST00000420957 435 ntBASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 AC004832.2-201ENST00000426397 482 ntBASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 IGHV3-65-201ENST00000523210 341 ntBASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 AC008667.4-201ENST00000607370 168 ntBASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA2E9PIF3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms