Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPBD1B2RD01 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 MYCLP1-201ENST00000372451 1075 ntBASIC15.69■□□□□ 0.1
CENPBD1B2RD01 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 PCED1CP-201ENST00000419887 785 ntBASIC15.69■□□□□ 0.1
CENPBD1B2RD01 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPBD1B2RD01 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 IER3-202ENST00000376377 1350 ntBASIC15.68■□□□□ 0.1
CENPBD1B2RD01 AC016734.2-201ENST00000624325 1377 ntBASIC15.68■□□□□ 0.1
CENPBD1B2RD01 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 AP000550.4-202ENST00000639755 178 ntBASIC15.68■□□□□ 0.1
CENPBD1B2RD01 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPBD1B2RD01 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms